Basic Information
Locus ID:
Chr0G012070
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
CAX6
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000377 | 79103 | 82507 | + | Chr0G012070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 85 | 241 | 9.9E-18 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 278 | 418 | 7.1E-19 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 265 | 421 | 1.8E-16 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 113 | 256 | 3.3E-14 | IPR044880 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 53 | 419 | 1.6E-99 | - |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 74 | 420 | 6.6E-89 | IPR004798 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13320.1 | cation exchanger 2. low affinity calcium antiporter CAX2 | 0 |
| RefSeq | XP_034606152.1 | putative vacuolar cation/proton exchanger 4 isoform X1 [Setaria viridis] | 0 |
| Q6YXZ1 | Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0138900 PE=3 SV=1 | 0 | |
| TrEMBL | A0A835B3U9 | Vacuolar cation/proton exchanger OS=Digitaria exilis OX=1010633 GN=HU200_043901 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology