Basic Information
Locus ID:
Chr0G010260
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000763 | 86738 | 89864 | + | Chr0G010260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 61 | 4.9E-12 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 304 | 363 | 1.6E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 521 | 580 | 1.2E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 700 | 968 | 1.3E-40 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 66 | 123 | 3.9E-11 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 68 | 374 | 3.22E-64 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 701 | 977 | 2.7E-64 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 296 | 582 | 7.06E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 176 | 1.4E-46 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 177 | 270 | 9.0E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 373 | 613 | 4.5E-61 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 698 | 782 | 3.4E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 783 | 993 | 1.3E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 271 | 372 | 2.4E-31 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 111 | 135 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 327 | 351 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 183 | 207 | 17.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 698 | 972 | 7.0E-22 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 87 | 110 | 0.59 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 255 | 279 | 72.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 423 | 447 | 210.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 698 | 983 | 34.223373 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 827 | 839 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 704 | 728 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_025804564.1 | MDIS1-interacting receptor like kinase 1-like [Panicum hallii] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6RS50 | Leucine-rich repeat receptor-like protein kinase PXL2 OS=Panicum miliaceum OX=4540 GN=C2845_PM11G12120 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology