Basic Information
Locus ID:
Chr0G009790
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000474 | 6980 | 10589 | - | Chr0G009790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 692 | 954 | 3.35817E-91 | - |
| Pfam | PF13855 | Leucine rich repeat | 93 | 131 | 6.4E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 68 | 1.2E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 689 | 888 | 8.2E-41 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 551 | 563 | 1.9 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 76 | 444 | 1.02E-61 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 680 | 952 | 2.05E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 376 | 594 | 6.8E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 291 | 616 | 4.5E-77 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 186 | 7.4E-43 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 290 | 5.9E-26 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 657 | 760 | 4.6E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 761 | 971 | 6.9E-56 | - |
| SMART | SM00369 | LRR_typ_2 | 312 | 336 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 118 | 142 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 241 | 265 | 12.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 686 | 953 | 3.1E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 548 | 572 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 192 | 216 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 524 | 547 | 310.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 686 | 953 | 35.69331 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 692 | 714 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 806 | 818 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 241 | 254 | 1.6E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 121 | 134 | 1.6E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 987 | 1016 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 980 | 1016 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_034589254.1 | receptor-like protein kinase HSL1 [Setaria viridis] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VBX9 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_24954 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology