Basic Information
Locus ID:
Chr0G009720
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000145 | 68453 | 69928 | + | Chr0G009720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 110 | 184 | 3.4E-22 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 112 | 183 | 6.88E-26 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 85 | 185 | 3.9E-24 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 185 | 19.552282 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 131 | 143 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006643879.1 | serine/threonine/tyrosine-protein kinase HT1-like [Oryza brachyantha] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A835BQE9 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_030873 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Sporobolus alterniflorus | 2 | Chr0G009720, Chr30G008420 |