HalophFGD

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Basic Information
Locus ID: Chr0G006600
Species & Taxonomic ID: Sporobolus alterniflorus & 29706
Genome Assembly: GWHCBIM00000000
Description: Wall-associated receptor kinase
Maps and Mapping Data
Chromosome/Scaffold Start End Strand ID
GWHCBIM00000234 1838759 1839809 - Chr0G006600
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
0.00 0.00 Da 0.00 0.00 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF13947 Wall-associated receptor kinase galacturonan-binding 35 96 2.9E-8 IPR025287
Gene Ontology
Molecular Function:
GO:0030247 (polysaccharide binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044336360.1 wall-associated receptor kinase 2-like [Triticum aestivum] 0
Swiss-Prot Q9S9M3 Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana OX=3702 GN=WAKL3 PE=2 SV=2 0
TrEMBL A0A5J9TR37 Wall-associated receptor kinase 2-like (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_37240 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 3 AH09.693, BH09.711, CH09.770
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_4AG0320520, gene-QOZ80_4BG0357240
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.3HG0219240.1, HORVU.MOREX.r3.3HG0219270.1
Poaceae Oryza coarctata 1 Oco07G003480
Poaceae Oryza sativa 15 LOC_Os04g18590.1, LOC_Os04g20680.1, LOC_Os04g29770.1 ...
LOC_Os04g29930.1, LOC_Os04g29960.1, LOC_Os04g29990.1, LOC_Os04g30010.1, LOC_Os04g30060.1, LOC_Os04g30160.1, LOC_Os04g30240.1, LOC_Os04g30250.2, LOC_Os04g30260.1, LOC_Os04g30270.1, LOC_Os04g30330.1, LOC_Os04g30370.1
Poaceae Puccinellia tenuiflora 1 Pt_Chr0200838
Poaceae Sporobolus alterniflorus 4 Chr0G006600, Chr25G013120, Chr30G012830, Chr30G012870
Poaceae Thinopyrum elongatum 2 Tel3E01G012600, Tel6E01G607000
Poaceae Triticum dicoccoides 3 gene_TRIDC3AG002230, gene_TRIDC6AG051200 ...
gene_TRIDC6BG059980
Poaceae Triticum aestivum 4 TraesCS3A02G006900.1, TraesCS3D02G003900.1 ...
TraesCS6A02G342000.1, TraesCS6B02G374000.1
Poaceae Zoysia japonica 3 nbis-gene-44989, nbis-gene-49124, nbis-gene-56965
Poaceae Zoysia macrostachya 3 Zma_g19503, Zma_g19505, Zma_g19511
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.