Basic Information
Locus ID:
Chr0G006230
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000234 | 638223 | 639135 | - | Chr0G006230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 87 | 232 | 4.56E-8 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 9 | 234 | 1.1E-7 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025825271.1 | L-type lectin-domain containing receptor kinase IV.2-like [Panicum hallii] | 0 |
| TrEMBL | A0A5J9WRR0 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_01942 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | AH09.63 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_9AG0689160, gene-QOZ80_9BG0715160 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_K222900 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr0G006230 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G942000 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG077050, gene_TRIDC2BG084460 ... |
| Poaceae | Triticum aestivum | 2 | TraesCS2B02G584100.1, TraesCS2D02G554400.1 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-53069, nbis-gene-53070, nbis-gene-56673 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g19250 |