Basic Information
Locus ID:
Chr0G002890
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Lipase (class 3)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000273 | 609714 | 613430 | - | Chr0G002890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18640.1 | alpha/beta-Hydrolases superfamily protein. | 0 |
| RefSeq | XP_002461172.1 | lipase [Sorghum bicolor] | 0 |
| P19515 | Lipase OS=Rhizomucor miehei OX=4839 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9VLN7 | Lipase_3 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_10651 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg11222, jg28002 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_4303 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah020769 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg51689, Sbi_jg5359 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg13220 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00001870 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl00781, Sgl05793 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000015741, gene:ENSEOMG00000029225 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0016180, CQ.Regalona.r1.3BG0016090 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30235080 |
| Apiaceae | Apium graveolens | 2 | Ag5G02434, Ag9G01844 |
| Arecaceae | Cocos nucifera | 3 | COCNU_04G009230, COCNU_16G003000, scaffold012222G000010 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103696397, gene-LOC103711735, gene-LOC103717820 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_05.99.V1.1, AsparagusV1_07.1520.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri13G30887, Ftri3G09642 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT5G18630.1, AT5G18640.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10013941m.g.v1.0, Thhalv10013982m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp6g25695.v2.2, Sp6g25700.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g044120.2N, BniB05g045060.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G1202 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G1292 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno02g01150, gene.Cymno04g05480 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0010s00017.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate02g27500, gene.Thate05g08380 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-5066, nbisL1-mrna-5450 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG11.1350 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00022522 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G11600 |
| Poaceae | Echinochloa crus-galli | 16 | AH01.3643, AH02.4448, AH03.4003, AH04.2104, AH05.2702 ... |
| Poaceae | Eleusine coracana subsp. coracana | 8 | gene-QOZ80_1AG0045910, gene-QOZ80_1BG0095880 ... |
| Poaceae | Hordeum vulgare | 5 | HORVU.MOREX.r3.1HG0059850.1, HORVU.MOREX.r3.2HG0114390.1 ... |
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_018306, gene-QYE76_038934, gene-QYE76_057760 ... |
| Poaceae | Oryza coarctata | 8 | Oco01G029480, Oco02G030660, Oco05G013450, Oco06G012960 ... |
| Poaceae | Oryza sativa | 5 | LOC_Os01g71010.1, LOC_Os03g22670.1, LOC_Os05g30900.1 ... |
| Poaceae | Paspalum vaginatum | 6 | gene-BS78_01G355400, gene-BS78_02G383500 ... |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0102717, Pt_Chr0305162, Pt_Chr0505278, Pt_Chr0505312 ... |
| Poaceae | Sporobolus alterniflorus | 13 | Chr02G001460, Chr05G032990, Chr05G033100, Chr07G014520 ... |
| Poaceae | Thinopyrum elongatum | 5 | Tel1E01G391100, Tel2E01G248600, Tel2E01G279200 ... |
| Poaceae | Triticum dicoccoides | 10 | gene_TRIDC1AG035610, gene_TRIDC1BG040690 ... |
| Poaceae | Triticum aestivum | 14 | TraesCS1A02G236500.1, TraesCS1B02G247200.1 ... |
| Poaceae | Zea mays | 5 | Zm00001eb016740_P002, Zm00001eb141920_P002 ... |
| Poaceae | Zoysia japonica | 3 | nbis-gene-1591, nbis-gene-37616, nbis-gene-48460 |
| Poaceae | Zoysia macrostachya | 6 | Zma_g11897, Zma_g1214, Zma_g18247, Zma_g19112, Zma_g26729 ... |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG03.2068, evm.TU.LG13.903, evm.TU.LG14.366 ... |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g10220, gene.Posoc02g32700 |
| Rhizophoraceae | Bruguiera sexangula | 3 | evm.TU.Scaffold_5_RagTag.255, evm.TU.Scaffold_5_RagTag.256 ... |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-10833 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-11110 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-10538 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000006l.164 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00013477 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-9187 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-7043 |
| Salicaceae | Populus euphratica | 1 | populus_peu22180 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132626828, gene-LOC132641956 |
| Solanaceae | Solanum chilense | 2 | SOLCI002861100, SOLCI005054800 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107008350, gene-LOC107022830, gene-LOC107024168 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_9412 |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G1589 |
| Zosteraceae | Zostera marina | 1 | Zosma03g20440.v3.1 |