Basic Information
Locus ID:
Chr09G026030
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
AT hook motif family protein, expressed
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000009 | 56517383 | 56524654 | + | Chr09G026030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 77 | 274 | 4.43E-7 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 532 | 572 | 5.57E-7 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 527 | 579 | 9.6E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 729 | 748 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 356 | 370 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 303 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 480 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 506 | 532 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 594 | 632 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 355 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 657 | 722 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 636 | 655 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 767 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 534 | - | - |
| Coils | Coil | Coil | 6 | 26 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_025804884.1 | ABC transporter F family member 4-like isoform X2 [Panicum hallii] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3GR96 | Tudor domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G304900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology