Basic Information
Locus ID:
Chr09G023940
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000009 | 54689377 | 54689815 | - | Chr09G023940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025798956.1 | probable E3 ubiquitin-protein ligase ATL44 [Panicum hallii] | 0 |
| TrEMBL | A0A5J9UXF9 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_19442 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.1BG0002570 |
| Poaceae | Echinochloa crus-galli | 3 | AH07.2932, BH07.2754, CH07.2827 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_2AG0140240 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0602480.1.CDS1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_008089, gene-QYE76_024237 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g44700.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G224000 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr06G005520, Chr09G023940, Chr15G007140, Chr15G019500 |
| Poaceae | Thinopyrum elongatum | 2 | Tel6E01G460500, Tel6E01G470100 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC6AG037730, gene_TRIDC6AG038730 ... |
| Poaceae | Triticum aestivum | 5 | TraesCS6A02G244500.1.cds1, TraesCS6A02G251500.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb250010_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-9223 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g14084 |