Basic Information
Locus ID:
Chr09G018110
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000009 | 48849290 | 48852294 | - | Chr09G018110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 18 | 155 | 2.31799E-63 | - |
| Pfam | PF00582 | Universal stress protein family | 19 | 150 | 3.9E-9 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 472 | 729 | 3.8E-39 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 19 | 153 | 3.43E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 455 | 732 | 1.34E-68 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 545 | 754 | 3.4E-47 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 12 | 153 | 1.8E-10 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 447 | 544 | 2.1E-24 | - |
| SMART | SM00220 | serkin_6 | 472 | 736 | 9.9E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 472 | 736 | 35.226887 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 591 | 603 | - | IPR008271 |
| Coils | Coil | Coil | 431 | 451 | - | - |
| Coils | Coil | Coil | 399 | 428 | - | - |
| Coils | Coil | Coil | 339 | 359 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31230.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_034577163.1 | U-box domain-containing protein 35-like [Setaria viridis] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4U6WJ66 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_1G352200v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology