Basic Information
Locus ID:
Chr09G012730
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
No apical meristem (NAM) protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000009 | 42414838 | 42417455 | + | Chr09G012730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 58 | 201 | 7.9E-18 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 42 | 220 | 1.44E-32 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 67 | 222 | 4.5E-23 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 57 | 220 | 25.447952 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 271 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01600.1 | NAC domain containing protein 44. | 0 |
| RefSeq | XP_034580078.1 | SUPPRESSOR OF GAMMA RESPONSE 1-like [Setaria viridis] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811Q3H5 | NAC domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS34247 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology