Basic Information
Locus ID:
Chr09G012540
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000009 | 42085251 | 42092901 | - | Chr09G012540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 11 | 112 | 2.4E-10 | IPR000210 |
| Pfam | PF02135 | TAZ zinc finger | 224 | 290 | 7.0E-6 | IPR000197 |
| SUPERFAMILY | SSF54695 | POZ domain | 8 | 112 | 2.51E-9 | IPR011333 |
| SUPERFAMILY | SSF57933 | TAZ domain | 192 | 294 | 9.55E-12 | IPR035898 |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 217 | 302 | 2.7E-10 | IPR035898 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 6 | 145 | 3.7E-19 | IPR011333 |
| SMART | SM00225 | BTB_4 | 13 | 117 | 3.4E-4 | IPR000210 |
| SMART | SM00551 | TAZ_2 | 193 | 291 | 4.7E-4 | IPR000197 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 13 | 82 | 10.59223 | IPR000210 |
| Coils | Coil | Coil | 169 | 189 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05690.1 | BTB and TAZ domain protein 3. BTB and TAZ domain protein. Acts redunantly with BT1 and BT2 during female gametophyte development. Acts with BT2 during male gametophyte development. | 0 |
| RefSeq | NP_001147219.1 | BTB/POZ and TAZ domain-containing protein 1 [Zea mays] | 0 |
| Q9SYL0 | BTB/POZ and TAZ domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BT3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9V0J2 | BTB domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_20980 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology