Basic Information
Locus ID:
Chr09G009600
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000009 | 34249051 | 34251586 | + | Chr09G009600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 27 | 156 | 6.52749E-30 | IPR002083 |
| Pfam | PF00917 | MATH domain | 46 | 156 | 1.3E-5 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 191 | 280 | 8.1E-16 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 174 | 314 | 1.48E-26 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 25 | 158 | 1.5E-32 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 174 | 286 | 2.5E-26 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 25 | 159 | 2.4E-30 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 287 | 349 | 2.1E-12 | - |
| SMART | SM00061 | math_3 | 31 | 139 | 8.7E-4 | IPR002083 |
| SMART | SM00225 | BTB_4 | 195 | 317 | 3.6E-15 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 195 | 263 | 15.804093 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 26 | 156 | 19.802843 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_025791694.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum hallii] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6S9R9 | Speckle-type POZ protein OS=Panicum miliaceum OX=4540 GN=C2845_PM02G13400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0125190, gene-QOZ80_2BG0180840 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr09G009600 |