Basic Information
Locus ID:
Chr09G009310
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000009 | 33761517 | 33769933 | - | Chr09G009310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 212 | 271 | 8.83223E-12 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 326 | 440 | 1.65676E-46 | - |
| Pfam | PF00651 | BTB/POZ domain | 332 | 441 | 2.6E-26 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 317 | 441 | 3.34E-33 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 209 | 277 | 3.43E-14 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 442 | 506 | 4.5E-15 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 316 | 438 | 3.0E-37 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 203 | 309 | 8.1E-13 | IPR008974 |
| SMART | SM00225 | BTB_4 | 340 | 443 | 8.5E-25 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 197 | 273 | 8.680111 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 340 | 408 | 17.541382 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 65 | 202 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 94 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_002464611.2 | BTB/POZ and MATH domain-containing protein 1 [Sorghum bicolor] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0A9VR63 | BTB domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 7 | gene-QOZ80_2AG0124660, gene-QOZ80_2AG0124680 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr09G009310 |