halophFGD

Basic Information

Locus ID: Chr09G001130

Species & Taxonomic ID: Sporobolus alterniflorus & 29706

Genome Assembly: GWHCBIM00000000

Description: Speckle-type POZ protein-like protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
GWHCBIM00000009	1609552	1610190	+	Chr09G001130

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
0.00	0.00 Da	0.00	0.00	0.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00121	MATH	19	146	9.77079E-32	IPR002083
Pfam	PF00917	MATH domain	43	145	2.1E-8	IPR002083
SUPERFAMILY	SSF49599	TRAF domain-like	16	151	1.06E-38	-
Gene3D	G3DSA:2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	16	150	1.6E-35	IPR008974
SMART	SM00061	math_3	22	128	9.0E-5	IPR002083
ProSiteProfiles	PS50144	MATH/TRAF domain profile.	17	145	22.794476	IPR002083

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_020176932.1	BTB/POZ and MATH domain-containing protein 3-like [Aegilops tauschii subsp. strangulata]	0
TrEMBL	A0A5J9SH22	Speckle-type POZ protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_56511 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Eleusine coracana subsp. coracana	3	gene-QOZ80_2AG0110870, gene-QOZ80_2BG0164290 ... gene-QOZ80_2BG0164320
Poaceae	Hordeum vulgare	13	HORVU.MOREX.r3.5HG0427590.1.CDS1 ... HORVU.MOREX.r3.5HG0427600.1.CDS1, HORVU.MOREX.r3.5HG0429960.1.CDS1, HORVU.MOREX.r3.5HG0518270.1.CDS1, HORVU.MOREX.r3.5HG0518280.1.CDS1, HORVU.MOREX.r3.5HG0518360.1.CDS1, HORVU.MOREX.r3.5HG0518370.1.CDS1, HORVU.MOREX.r3.5HG0518380.1.CDS1, HORVU.MOREX.r3.5HG0518390.1.CDS1, HORVU.MOREX.r3.5HG0518410.1.CDS1, HORVU.MOREX.r3.5HG0518450.1.CDS1, HORVU.MOREX.r3.5HG0518460.1.CDS1, HORVU.MOREX.r3.5HG0518500.1.CDS1
Poaceae	Lolium multiflorum	12	gene-QYE76_009241, gene-QYE76_009243, gene-QYE76_016733 ... gene-QYE76_016734, gene-QYE76_028417, gene-QYE76_061234, gene-QYE76_061235, gene-QYE76_061248, gene-QYE76_064568, gene-QYE76_064569, gene-QYE76_071491, gene-QYE76_071492
Poaceae	Oryza coarctata	1	Oco04G008990
Poaceae	Oryza sativa	6	LOC_Os02g20590.1, LOC_Os02g20600.1, LOC_Os02g20620.1 ... LOC_Os02g20690.1, LOC_Os02g20720.1, LOC_Os10g29460.1
Poaceae	Puccinellia tenuiflora	11	Pt_Chr0103080, Pt_Chr0103081, Pt_Chr0104126, Pt_Chr0104129 ... Pt_Chr0105447, Pt_Chr0402069, Pt_Chr0500238, Pt_Chr0500240, Pt_Chr0500246, Pt_Chr0500632, Pt_Chr0500635
Poaceae	Sporobolus alterniflorus	2	Chr09G001120, Chr09G001130
Poaceae	Thinopyrum elongatum	16	Tel1E01G144500, Tel1E01G145100, Tel1E01G145300 ... Tel2E01G982800, Tel4E01G649300, Tel5E01G088500, Tel5E01G088600, Tel5E01G108500, Tel5E01G109100, Tel5E01G681300, Tel5E01G681400, Tel5E01G681500, Tel5E01G682000, Tel5E01G682200, Tel5E01G682600, Tel6E01G719300
Poaceae	Triticum dicoccoides	21	gene_TRIDC1AG009740, gene_TRIDC1AG009770 ... gene_TRIDC1AG009780, gene_TRIDC1AG064490, gene_TRIDC1BG012680, gene_TRIDC2AG079210, gene_TRIDC2BG080030, gene_TRIDC4AG065610, gene_TRIDC5AG005580, gene_TRIDC5AG007300, gene_TRIDC5AG007350, gene_TRIDC5AG062580, gene_TRIDC5BG006060, gene_TRIDC5BG008760, gene_TRIDC5BG066970, gene_TRIDC5BG066980, gene_TRIDC5BG066990, gene_TRIDC5BG067000, gene_TRIDC5BG067010, gene_TRIDC5BG067020, gene_TRIDC7BG004270
Poaceae	Triticum aestivum	51	TraesCS1A02G070700.1.cds1, TraesCS1A02G070800.1.cds1 ... TraesCS1A02G071000.1.cds1, TraesCS1A02G380800.1.cds1, TraesCS1B02G089500.1, TraesCS1D02G073200.1.cds1, TraesCS1D02G073400.1.cds1, TraesCS1D02G449100.1.cds1, TraesCS2D02G597100.1, TraesCS5A02G035800.1.cds1, TraesCS5A02G035900.1.cds1, TraesCS5A02G047500.1.cds1, TraesCS5A02G047800.1.cds1, TraesCS5A02G434800.1, TraesCS5A02G434900.1.cds1, TraesCS5A02G435000.1.cds1, TraesCS5A02G435100.1.cds1, TraesCS5A02G435200.1.cds1, TraesCS5A02G435300.1.cds1, TraesCS5B02G036300.1, TraesCS5B02G036500.1.cds1, TraesCS5B02G052400.1.cds1, TraesCS5B02G437600.1.cds1, TraesCS5B02G437700.1.cds1, TraesCS5B02G437800.1.cds1, TraesCS5B02G437900.1.cds1, TraesCS5B02G438000.1.cds1, TraesCS5B02G438100.1.cds1, TraesCS5B02G438300.1, TraesCS5B02G438400.1.cds1, TraesCS5B02G438500.1.cds1, TraesCS5B02G438600.1.cds1, TraesCS5D02G043800.1.cds1, TraesCS5D02G043900.1.cds1, TraesCS5D02G044000.1.cds1, TraesCS5D02G058100.1.cds1, TraesCS5D02G442400.1.cds1, TraesCS5D02G442500.1.cds1, TraesCS5D02G442600.1.cds1, TraesCS5D02G442700.1.cds1, TraesCS5D02G442800.1.cds1, TraesCS5D02G442900.1.cds1, TraesCS5D02G443100.1.cds1, TraesCS6A02G398300.1.cds1, TraesCS6D02G382500.1.cds1, TraesCS7A02G112400.1.cds1, TraesCS7B02G027800.1.cds1, TraesCS7D02G126600.1.cds1, TraesCS7D02G126700.1.cds1, TraesCSU02G003100.1.cds1, TraesCSU02G188900.1.cds1
Poaceae	Zoysia japonica	1	nbis-gene-34043
Poaceae	Zoysia macrostachya	1	Zma_g21999
Tamaricaceae	Reaumuria soongarica	1	STRG.1995_chr01_-