Basic Information
Locus ID:
Chr08G017450
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000008 | 52665454 | 52669406 | + | Chr08G017450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 72 | 158 | 4.36498E-31 | - |
| Pfam | PF00855 | PWWP domain | 72 | 158 | 1.7E-12 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 67 | 184 | 4.69E-25 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 63 | 166 | 4.8E-20 | - |
| SMART | SM00293 | PWWP_4 | 72 | 133 | 1.3E-6 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 74 | 135 | 12.857012 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 716 | 740 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 814 | 839 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 507 | 525 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 666 | 693 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 814 | 831 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 626 | 645 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 486 | 766 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 890 | 914 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 605 | 625 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 408 | 432 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 694 | 708 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 651 | 665 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 543 | 604 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09670.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_021312812.1 | uncharacterized protein LOC110433943 [Sorghum bicolor] | 0 |
| Q9SF36 | PWWP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PDP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VNP3 | PWWP domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_19031 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology