HalophFGD

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Basic Information
Locus ID: Chr08G017020
Species & Taxonomic ID: Sporobolus alterniflorus & 29706
Genome Assembly: GWHCBIM00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
GWHCBIM00000008 52100653 52102228 + Chr08G017020
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
0.00 0.00 Da 0.00 0.00 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 34 48 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 52 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 27 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_008644887.1 uncharacterized protein LOC103626276 [Zea mays] 0
TrEMBL A0A1D6GSL5 Uncharacterized protein OS=Zea mays OX=4577 GN=103626276 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 2 BH01.2957, CH01.3154
Poaceae Eleusine coracana subsp. coracana 5 gene-QOZ80_1AG0034520, gene-QOZ80_5AG0375060 ...
gene-QOZ80_5BG0421130, gene-QOZ80_5BG0421180, gene-QOZ80_9AG0679290
Poaceae Paspalum vaginatum 1 gene-BS78_03G194300
Poaceae Sporobolus alterniflorus 6 Chr01G021480, Chr02G008650, Chr05G024830, Chr08G017020 ...
Chr12G016380, Chr22G012560
Poaceae Zea mays 2 Zm00001eb224500_P001, Zm00001eb224510_P001
Poaceae Zoysia japonica 5 nbis-gene-23678, nbis-gene-23679, nbis-gene-23680 ...
nbis-gene-23681, nbis-gene-23684
Poaceae Zoysia macrostachya 2 Zma_g28150, Zma_g28151
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.