Basic Information
Locus ID:
Chr08G013790
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000008 | 47491496 | 47494825 | - | Chr08G013790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 77 | 485 | 1.3E-174 | IPR002554 |
| SUPERFAMILY | SSF48371 | ARM repeat | 87 | 467 | 3.04E-147 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 82 | 484 | 3.4E-174 | IPR011989 |
| PIRSF | PIRSF028043 | PP2A_B56 | 5 | 498 | 2.6E-219 | IPR002554 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 56 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04113 (Meiosis - yeast)
map04113 (Meiosis - yeast)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25510.1 | Protein phosphatase 2A regulatory B subunit family protein. | 0 |
| RefSeq | XP_012701954.1 | serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform [Setaria italica] | 0 |
| Q6I621 | Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform OS=Oryza sativa subsp. japonica OX=39947 GN=B'KAPPA PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VJ04 | Serine/threonine protein phosphatase 2A regulatory subunit OS=Eragrostis curvula OX=38414 GN=EJB05_17389 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology