Basic Information
Locus ID:
Chr08G010390
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000008 | 37669657 | 37673922 | + | Chr08G010390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14134 | PKc_CLK | 44 | 339 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 57 | 304 | 2.4E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 44 | 317 | 5.93E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 44 | 137 | 6.9E-103 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 111 | 328 | 6.9E-103 | - |
| SMART | SM00220 | serkin_6 | 57 | 347 | 6.7E-56 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 57 | 347 | 33.290531 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 178 | 190 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32660.2 | Protein kinase superfamily protein. Encodes protein kinase AME3. | 0 |
| RefSeq | XP_004969049.1 | serine/threonine-protein kinase AFC3 [Setaria italica] | 0 |
| P51568 | Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana OX=3702 GN=AFC3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3L6R0V7 | Serine/threonine-protein kinase AFC3 OS=Panicum miliaceum OX=4540 GN=C2845_PM08G17570 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology