Basic Information
Locus ID:
Chr08G005450
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000008 | 6016077 | 6018600 | + | Chr08G005450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 46 | 164 | 3.07369E-18 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 328 | 411 | 3.63311E-16 | - |
| CDD | cd14066 | STKc_IRAK | 482 | 746 | 6.42489E-92 | - |
| Pfam | PF00954 | S-locus glycoprotein domain | 239 | 309 | 1.2E-7 | IPR000858 |
| Pfam | PF00069 | Protein kinase domain | 479 | 741 | 3.0E-45 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 337 | 395 | 5.9E-8 | IPR003609 |
| Pfam | PF01453 | D-mannose binding lectin | 102 | 187 | 1.2E-17 | IPR001480 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 460 | 745 | 2.97E-77 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 110 | 182 | 2.49E-13 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 551 | 753 | 1.9E-57 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 34 | 161 | 3.4E-10 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 446 | 550 | 3.5E-29 | - |
| SMART | SM00220 | serkin_6 | 476 | 744 | 3.0E-37 | IPR000719 |
| SMART | SM00108 | blect_4 | 43 | 164 | 7.3E-14 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 9 | 774 | 1.1E-213 | IPR024171 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 476 | 748 | 36.654423 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 331 | 412 | 8.10507 | IPR003609 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 37 | 160 | 10.484186 | IPR001480 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 595 | 607 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 482 | 504 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_025813992.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Panicum hallii] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9UGP9 | non-specific serine/threonine protein kinase (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_32660 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology