Basic Information
Locus ID:
Chr07G027310
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
IAA16
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000007 | 59294114 | 59296668 | - | Chr07G027310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 11 | 224 | 1.9E-76 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 116 | 214 | 2.65E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 118 | 227 | 4.9E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 123 | 215 | 25.592161 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 84 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 99 | 121 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_039828626.1 | auxin-responsive protein IAA13-like [Panicum virgatum] | 0 |
| A2XLV9 | Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica OX=39946 GN=IAA13 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9WCP3 | Auxin-responsive protein OS=Eragrostis curvula OX=38414 GN=EJB05_04567 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology