Basic Information
Locus ID:
Chr07G026110
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000007 | 57788826 | 57792661 | - | Chr07G026110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 610 | 884 | 1.73197E-96 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 347 | 380 | 2.3E-4 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 606 | 837 | 2.6E-47 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 78 | 5.7E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 72 | 458 | 5.78E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 592 | 905 | 4.28E-79 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 343 | 468 | 1.8E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 339 | 2.6E-70 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 565 | 681 | 5.2E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 682 | 902 | 4.5E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 128 | 151 | 1.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 203 | 226 | 100.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 604 | 892 | 4.7E-45 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 430 | 453 | 13.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 604 | 887 | 40.767414 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 610 | 632 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 729 | 741 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 940 | 961 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 492 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_025793902.1 | receptor protein kinase TMK1-like [Panicum hallii] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WAL4 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_04866 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology