Basic Information
Locus ID:
Chr07G024970
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
CPK30
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000007 | 56327615 | 56330276 | + | Chr07G024970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 89 | 347 | 7.53939E-122 | - |
| CDD | cd00051 | EFh | 467 | 558 | 7.41906E-15 | IPR002048 |
| CDD | cd00051 | EFh | 396 | 454 | 1.78579E-16 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 394 | 455 | 4.7E-12 | IPR002048 |
| Pfam | PF13202 | EF hand | 468 | 489 | 0.019 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 90 | 348 | 1.0E-69 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 377 | 584 | 2.18E-36 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 86 | 357 | 8.5E-86 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 176 | 358 | 1.3E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 92 | 175 | 2.0E-24 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 359 | 560 | 4.5E-48 | - |
| SMART | SM00054 | efh_1 | 467 | 495 | 0.0026 | IPR002048 |
| SMART | SM00220 | serkin_6 | 90 | 348 | 7.2E-96 | IPR000719 |
| SMART | SM00054 | efh_1 | 395 | 423 | 3.5E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 431 | 459 | 0.045 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 90 | 348 | 47.523468 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 463 | 498 | 13.034948 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 391 | 426 | 15.461849 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 427 | 462 | 10.133827 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 96 | 119 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 404 | 416 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 476 | 488 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 440 | 452 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 210 | 222 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G74740.1 | calcium-dependent protein kinase 30. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_039830916.1 | calcium-dependent protein kinase 9-like [Panicum virgatum] | 0 |
| Q6AVI8 | Calcium-dependent protein kinase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0A9DH90 | Calcium-dependent protein kinase 30 OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology