Basic Information
Locus ID:
Chr07G024530
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000007 | 55641805 | 55642848 | + | Chr07G024530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 22 | 139 | 2.3E-6 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 140 | 275 | 2.9E-24 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 13 | 291 | 6.18E-62 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 5 | 139 | 4.2E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 140 | 282 | 8.7E-33 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 17 | 275 | 25.714706 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 23 | 46 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76540.1 | cyclin-dependent kinase B2;1. Encodes a cyclin-dependent protein kinase involved in regulation of the G2/M transition of the mitotic cell cycle. Specifically binds to the cyclin CYCD4;1, expressed in shoot meristem, young leaves and vascular tissue during the G2/M phase. Required for proper organization of the shoot apical meristem and for hormone signaling. | 0 |
| RefSeq | XP_004981336.1 | putative cyclin-dependent kinase F-2 [Setaria italica] | 0 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 0 | |
| TrEMBL | K4AJ44 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101764304 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology