Basic Information
Locus ID:
Chr07G019290
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000007 | 45524415 | 45525623 | - | Chr07G019290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 168 | 214 | 4.2E-9 | IPR006652 |
| Pfam | PF00646 | F-box domain | 14 | 46 | 2.5E-7 | IPR001810 |
| SUPERFAMILY | SSF117281 | Kelch motif | 96 | 354 | 4.18E-42 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 12 | 53 | 5.76E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 15 | 52 | 2.2E-5 | - |
| Gene3D | G3DSA:2.120.10.80 | - | 293 | 369 | 6.4E-6 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 75 | 292 | 4.0E-34 | IPR015915 |
| SMART | SM00612 | kelc_smart | 180 | 229 | 2.5E-4 | IPR006652 |
| SMART | SM00612 | kelc_smart | 131 | 179 | 9.3E-5 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | NP_001309040.1 | F-box/kelch-repeat protein At2g44130-like [Zea mays] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3L6FTW9 | F-box/kelch-repeat protein OS=Zea mays OX=4577 GN=At2g44130_0 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology