Basic Information
Locus ID:
Chr07G018770
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000007 | 42296508 | 42299576 | - | Chr07G018770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 455 | 754 | 4.7E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 434 | 758 | 5.4E-67 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 21 | 305 | 1.44E-9 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 542 | 766 | 2.8E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 430 | 541 | 9.8E-30 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 77 | 317 | 7.4E-16 | IPR009091 |
| SMART | SM00220 | serkin_6 | 454 | 733 | 1.9E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 454 | 762 | 34.449516 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 589 | 601 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 460 | 482 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 484 | 503 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_002450637.1 | serine/threonine-protein kinase-like protein CCR4 [Sorghum bicolor] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6F6G7 | Serine/threonine-protein kinase-like protein CCR4 OS=Zea mays OX=4577 GN=CCR4_5 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology