Basic Information
Locus ID:
Chr07G016900
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000007 | 24140779 | 24141870 | + | Chr07G016900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 302 | 343 | 1.44261E-11 | - |
| Pfam | PF13923 | Zinc finger, C3HC4 type (RING finger) | 301 | 342 | 5.7E-7 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 293 | 349 | 5.55E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 277 | 350 | 3.9E-12 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 302 | 343 | 11.191014 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 97 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_013595040.1 | PREDICTED: RING-H2 finger protein ATL18-like [Brassica oleracea var. oleracea] | 0 |
| TrEMBL | A0A5J9UMC2 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_27009 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology