Basic Information
Locus ID:
Chr07G015190
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000007 | 19524754 | 19528427 | - | Chr07G015190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 148 | 227 | 3.9E-5 | IPR024977 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 87 | 348 | 1.19E-30 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 10 | 350 | 6.4E-60 | IPR015943 |
| SMART | SM00320 | WD40_4 | 173 | 211 | 89.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 131 | 169 | 0.15 | IPR001680 |
| SMART | SM00320 | WD40_4 | 306 | 345 | 0.015 | IPR001680 |
| SMART | SM00320 | WD40_4 | 263 | 302 | 78.0 | IPR001680 |
| Coils | Coil | Coil | 121 | 141 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50550.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_025827591.1 | SEC12-like protein 2 isoform X1 [Panicum hallii] | 0 |
| Q39221 | SEC12-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=STL2P PE=1 SV=4 | 0 | |
| TrEMBL | A0A5J9V368 | ANAPC4_WD40 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_21951 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology