Basic Information
Locus ID:
Chr07G015050
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000007 | 19300152 | 19303620 | + | Chr07G015050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 307 | 343 | 2.50491E-5 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 414 | 682 | 2.6E-42 | IPR001245 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 40 | 76 | 2.5E-8 | IPR025287 |
| SUPERFAMILY | SSF57184 | Growth factor receptor domain | 255 | 346 | 2.51E-6 | IPR009030 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 413 | 689 | 1.11E-63 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 404 | 489 | 4.4E-20 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 264 | 347 | 1.4E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 491 | 691 | 3.9E-48 | - |
| SMART | SM00220 | serkin_6 | 413 | 690 | 8.5E-25 | IPR000719 |
| SMART | SM00181 | egf_5 | 257 | 306 | 2.1 | IPR000742 |
| SMART | SM00181 | egf_5 | 310 | 347 | 25.0 | IPR000742 |
| SMART | SM00179 | egfca_6 | 307 | 347 | 7.9E-5 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 413 | 692 | 33.898293 | IPR000719 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 307 | 333 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 324 | 335 | - | IPR000152 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 419 | 443 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 536 | 548 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_044446746.1 | wall-associated receptor kinase 1-like [Triticum aestivum] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | Q7G4Y9 | Os10g0174800 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0174800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology