Basic Information
Locus ID:
Chr07G015030
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000007 | 19197351 | 19203952 | + | Chr07G015030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 315 | 350 | 1.7084E-6 | - |
| Pfam | PF00069 | Protein kinase domain | 425 | 685 | 5.2E-43 | IPR000719 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 43 | 83 | 2.1E-9 | IPR025287 |
| Pfam | PF07645 | Calcium-binding EGF domain | 315 | 355 | 1.9E-6 | IPR001881 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 423 | 690 | 1.05E-63 | IPR011009 |
| SUPERFAMILY | SSF57184 | Growth factor receptor domain | 266 | 359 | 1.8E-5 | IPR009030 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 411 | 497 | 4.1E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 498 | 696 | 2.3E-49 | - |
| Gene3D | G3DSA:2.90.20.10 | Plasmodium vivax P25 domain | 256 | 361 | 4.6E-13 | - |
| SMART | SM00220 | serkin_6 | 422 | 690 | 6.7E-24 | IPR000719 |
| SMART | SM00181 | egf_5 | 263 | 314 | 0.53 | IPR000742 |
| SMART | SM00181 | egf_5 | 318 | 356 | 4.4 | IPR000742 |
| SMART | SM00179 | egfca_6 | 315 | 356 | 6.9E-6 | IPR001881 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 315 | 356 | 8.856188 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 422 | 690 | 33.884159 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 428 | 451 | - | IPR017441 |
| ProSitePatterns | PS01186 | EGF-like domain signature 2. | 341 | 355 | - | IPR000742 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 542 | 554 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 315 | 341 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 332 | 343 | - | IPR000152 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_044421868.1 | wall-associated receptor kinase 1-like [Triticum aestivum] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | Q7G4Y9 | Os10g0174800 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0174800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology