Basic Information
Locus ID:
Chr07G013790
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000007 | 16869780 | 16871261 | - | Chr07G013790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 67 | 313 | 1.1E-29 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 71 | 315 | 4.53E-51 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 117 | 328 | 1.4E-45 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 50 | 116 | 6.3E-8 | - |
| SMART | SM00220 | serkin_6 | 28 | 316 | 1.3E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 3 | 316 | 23.707678 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25490.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_004980707.4 | wall-associated receptor kinase 4 [Setaria italica] | 0 |
| Q9LSV3 | Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana OX=3702 GN=WAKL16 PE=3 SV=1 | 0 | |
| TrEMBL | A0A835FWQ0 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_003348 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH04.2283, BH04.2243, CH03.2334, CH04.2670 |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_9AG0692750, gene-QOZ80_9AG0692840 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0103900.1 |
| Poaceae | Oryza coarctata | 4 | Oco08G001920, Oco08G001950, Oco18G001800, Oco21G009920 |
| Poaceae | Oryza sativa | 10 | ChrSy.fgenesh.mRNA.14, LOC_Os04g14304.1, LOC_Os11g46860.1 ... |
| Poaceae | Paspalum vaginatum | 17 | gene-BS78_05G102300, gene-BS78_05G242700, gene-BS78_K099700 ... |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0205048, Pt_Chr0205049, Pt_Chr0205050 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr07G013790, Chr0G006760, Chr31G008600 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G159400 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC2AG008000, gene_TRIDC2AG008010 ... |
| Poaceae | Triticum aestivum | 8 | TraesCS2A02G071800.1, TraesCS2A02G071900.1 ... |
| Poaceae | Zoysia japonica | 3 | nbis-gene-18470, nbis-gene-18479, nbis-gene-37655 |