Basic Information
Locus ID:
Chr07G010800
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
NAC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000007 | 11237846 | 11240487 | + | Chr07G010800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 175 | 211 | 7.24477E-17 | - |
| Pfam | PF01849 | NAC domain | 97 | 152 | 3.3E-20 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 175 | 211 | 1.1E-10 | IPR044034 |
| Gene3D | G3DSA:1.10.8.10 | - | 174 | 210 | 3.4E-18 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 103 | 156 | 1.9E-28 | IPR038187 |
| SMART | SM01407 | NAC_2 | 97 | 153 | 4.5E-23 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 94 | 159 | 16.71294 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 83 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 51 | - | - |
| Coils | Coil | Coil | 43 | 75 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_004984363.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Setaria italica] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7CCM4 | NAC-A/B domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G475500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology