Basic Information
Locus ID:
Chr07G006930
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000007 | 6681668 | 6684909 | - | Chr07G006930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 127 | 141 | 1.3 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 511 | 569 | 8.3E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 76 | 1.4E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 721 | 1005 | 4.2E-41 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 313 | 1.94E-49 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 261 | 601 | 1.57E-69 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 717 | 1008 | 1.37E-67 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 387 | 634 | 1.5E-70 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 812 | 1030 | 3.8E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 98 | 386 | 1.2E-84 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 97 | 4.5E-12 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 709 | 811 | 5.1E-16 | - |
| SMART | SM00369 | LRR_typ_2 | 126 | 150 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 558 | 582 | 75.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 463 | 486 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 342 | 366 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 438 | 462 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 198 | 222 | 12.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 719 | 1008 | 3.8E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 294 | 318 | 11.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 719 | 1015 | 36.315205 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 725 | 749 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 858 | 870 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 513 | 526 | 3.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 558 | 571 | 3.7E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1010 | 1030 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_034575566.1 | MDIS1-interacting receptor like kinase 1-like [Setaria viridis] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5W7W4 | MDIS1-interacting receptor like kinase 1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0005523 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology