Basic Information
Locus ID:
Chr07G002420
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000007 | 2279235 | 2284710 | + | Chr07G002420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 419 | 739 | 4.6E-104 | IPR001752 |
| Pfam | PF00307 | Calponin homology (CH) domain | 40 | 160 | 1.4E-14 | IPR001715 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 38 | 173 | 1.63E-23 | IPR036872 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 398 | 772 | 3.32E-113 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 397 | 782 | 5.1E-125 | IPR036961 |
| Gene3D | G3DSA:1.10.418.10 | - | 25 | 177 | 9.9E-28 | IPR036872 |
| SMART | SM00033 | ch_5 | 40 | 159 | 1.6E-10 | IPR001715 |
| SMART | SM00129 | kinesin_4 | 386 | 748 | 1.2E-145 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 393 | 740 | 113.046738 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 38 | 161 | 18.561687 | IPR001715 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 641 | 659 | 5.2E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 690 | 711 | 5.2E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 466 | 487 | 5.2E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 610 | 627 | 5.2E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 779 | 800 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 988 | 1032 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 908 | 929 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 966 | 1032 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 908 | 928 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 772 | 800 | - | - |
| Coils | Coil | Coil | 1027 | 1032 | - | - |
| Coils | Coil | Coil | 381 | 401 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47500.1 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_034573271.1 | kinesin-like protein KIN-14F [Setaria viridis] | 0 |
| Q10MN5 | Kinesin-like protein KIN-14F OS=Oryza sativa subsp. japonica OX=39947 GN=KIN14F PE=2 SV=2 | 0 | |
| TrEMBL | A0A4U6T4I8 | Kinesin-4 OS=Setaria viridis OX=4556 GN=SEVIR_9G437200v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology