halophFGD

Basic Information

Locus ID: Chr07G001320

Species & Taxonomic ID: Sporobolus alterniflorus & 29706

Genome Assembly: GWHCBIM00000000

Description: Leucine rich repeat N-terminal domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
GWHCBIM00000007	1150167	1160483	-	Chr07G001320

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
0.00	0.00 Da	0.00	0.00	0.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	365	513	7.7E-19	IPR000719
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	514	615	4.3E-7	IPR001245
Pfam	PF08263	Leucine rich repeat N-terminal domain	35	68	5.2E-6	IPR013210
Pfam	PF13855	Leucine rich repeat	143	201	1.9E-7	IPR001611
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	366	617	2.73E-49	IPR011009
SUPERFAMILY	SSF52058	L domain-like	54	250	1.28E-24	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	326	437	8.9E-19	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	439	514	1.2E-13	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	32	108	1.6E-5	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	122	256	7.0E-34	IPR032675
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	515	636	1.5E-19	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	362	620	23.297791	IPR000719
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	368	399	-	IPR017441
PRINTS	PR00019	Leucine-rich repeat signature	210	223	5.4E-6	-
PRINTS	PR00019	Leucine-rich repeat signature	167	180	5.4E-6	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G58300.1	Leucine-rich repeat protein kinase family protein.
RefSeq	NP_001168611.1	putative leucine-rich repeat receptor-like protein kinase family protein precursor [Zea mays]
Swiss-Prot	Q9LVM0	Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana OX=3702 GN=At5g58300 PE=1 SV=1
TrEMBL	A0A5J9WFW3	Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_06779 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	15	jg10089, jg13917, jg14682, jg16721, jg16722, jg2219, jg23530 ... jg33948, jg34069, jg35707, jg38064, jg3899, jg4748, jg8415, jg8416
Aizoaceae	Mesembryanthemum crystallinum	5	gene_14599, gene_16186, gene_17106, gene_1783, gene_9033
Amaranthaceae	Atriplex hortensis	5	Ah004504, Ah014456, Ah018728, Ah031571, Ah032164
Amaranthaceae	Beta vulgaris	5	BVRB_2g038630, BVRB_3g052610, BVRB_5g099450, BVRB_7g156710 ... BVRB_8g195510
Amaranthaceae	Salicornia bigelovii	10	Sbi_jg15153, Sbi_jg2118, Sbi_jg23986, Sbi_jg24882 ... Sbi_jg30099, Sbi_jg34390, Sbi_jg43550, Sbi_jg55987, Sbi_jg7812, Sbi_jg8742
Amaranthaceae	Salicornia europaea	5	Seu_jg12218, Seu_jg18353, Seu_jg19860, Seu_jg26464 ... Seu_jg2649
Amaranthaceae	Suaeda aralocaspica	5	GOSA_00001096, GOSA_00004127, GOSA_00005849, GOSA_00007881 ... GOSA_00019999
Amaranthaceae	Suaeda glauca	11	Sgl01429, Sgl06582, Sgl06591, Sgl12789, Sgl18017, Sgl42128 ... Sgl46897, Sgl52149, Sgl57422, Sgl66118, Sgl70430
Amaranthaceae	Chenopodium album	13	gene:ENSEOMG00000006432, gene:ENSEOMG00000007739 ... gene:ENSEOMG00000010145, gene:ENSEOMG00000013120, gene:ENSEOMG00000021506, gene:ENSEOMG00000021906, gene:ENSEOMG00000030046, gene:ENSEOMG00000032030, gene:ENSEOMG00000035661, gene:ENSEOMG00000040755, gene:ENSEOMG00000044377, gene:ENSEOMG00000044441, gene:ENSEOMG00000051069
Amaranthaceae	Chenopodium quinoa	10	CQ.Regalona.r1.2AG0003190, CQ.Regalona.r1.2BG0004420 ... CQ.Regalona.r1.3AG0004230, CQ.Regalona.r1.3BG0004380, CQ.Regalona.r1.5AG0006330, CQ.Regalona.r1.5BG0006620, CQ.Regalona.r1.7AG0023270, CQ.Regalona.r1.7BG0025940, CQ.Regalona.r1.8AG0020920, CQ.Regalona.r1.8BG0021500
Anacardiaceae	Pistacia vera	7	pistato.v30131740, pistato.v30134920, pistato.v30178260 ... pistato.v30184790, pistato.v30255890, pistato.v30269430, pistato.v30286470
Apiaceae	Apium graveolens	7	Ag10G02550, Ag2G01242, Ag2G02073, Ag2G02642, Ag4G01545 ... Ag8G00013, Ag8G00601
Arecaceae	Cocos nucifera	9	COCNU_03G012710, COCNU_04G004760, COCNU_04G012320 ... COCNU_06G000520, COCNU_11G002680, COCNU_12G006130, COCNU_16G005600, contig69418629G000010, scaffold020148G000020
Arecaceae	Phoenix dactylifera	8	gene-LOC103705968, gene-LOC103709674, gene-LOC103710860 ... gene-LOC103716681, gene-LOC103721644, gene-LOC103722177, gene-LOC103723918, gene-LOC103724205
Asparagaceae	Asparagus officinalis	5	AsparagusV1_01.1588.V1.1, AsparagusV1_05.570.V1.1 ... AsparagusV1_07.2495.V1.1, AsparagusV1_08.3331.V1.1, AsparagusV1_Unassigned.1089.V1.1
Asteraceae	Flaveria trinervia	14	Ftri14G05084, Ftri15G03821, Ftri15G29839, Ftri3G26487 ... Ftri4G12577, Ftri4G17850, Ftri4G18004, Ftri6G09085, Ftri6G27672, Ftri7G11592, Ftri7G26537, Ftri8G07162, Ftri9G05994, Ftri9G34051
Brassicaceae	Arabidopsis thaliana	8	AT1G64210.1, AT2G26730.1, AT3G08680.1, AT4G23740.1 ... AT5G05160.1, AT5G41680.1, AT5G53320.1, AT5G58300.1
Brassicaceae	Eutrema salsugineum	8	Thhalv10012925m.g.v1.0, Thhalv10012946m.g.v1.0 ... Thhalv10013013m.g.v1.0, Thhalv10020278m.g.v1.0, Thhalv10022498m.g.v1.0, Thhalv10024075m.g.v1.0, Thhalv10024674m.g.v1.0, Thhalv10028151m.g.v1.0
Brassicaceae	Schrenkiella parvula	9	Sp1g29030.v2.2, Sp2g00520.v2.2, Sp3g07120.v2.2 ... Sp4g08760.v2.2, Sp6g15470.v2.2, Sp6g19960.v2.2, Sp6g37670.v2.2, Sp7g00390.v2.2, Sp7g21680.v2.2
Brassicaceae	Brassica nigra	13	BniB01g016980.2N, BniB01g055860.2N, BniB02g031600.2N ... BniB02g055480.2N, BniB02g080730.2N, BniB04g022670.2N, BniB04g023440.2N, BniB05g013430.2N, BniB06g016000.2N, BniB06g059150.2N, BniB07g058580.2N, BniB08g013290.2N, BniB08g016690.2N
Casuarinaceae	Casuarina equisetifolia	5	Ceq03G0218, Ceq06G0698, Ceq08G0869, Ceq08G2459, Ceq09G1549
Casuarinaceae	Casuarina glauca	7	Cgl02G0013, Cgl03G0259, Cgl06G0721, Cgl08G0887, Cgl08G2695 ... Cgl08G2698, Cgl09G1647
Cymodoceaceae	Cymodocea nodosa	7	gene.Cymno01g13220, gene.Cymno02g12760, gene.Cymno04g11740 ... gene.Cymno06g02090, gene.Cymno12g00240, gene.Cymno15g05520, gene.Cymno16g02120
Hydrocharitaceae	Thalassia testudinum	7	gene.Thate01g29730, gene.Thate03g17540, gene.Thate03g20150 ... gene.Thate04g24070, gene.Thate06g06470, gene.Thate06g15330, gene.Thate07g16120
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-115, nbisL1-mrna-12529, nbisL1-mrna-4320
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG01.2835, evm.TU.LG01.526, evm.TU.LG07.1020 ... evm.TU.LG10.1492
Plantaginaceae	Plantago ovata	7	Pov_00002585, Pov_00005313, Pov_00005445, Pov_00028422 ... Pov_00036319, Pov_00036726, Pov_00041076
Plumbaginaceae	Limonium bicolor	7	Lb0G38069, Lb1G04253, Lb2G09531, Lb3G17436, Lb4G25633 ... Lb5G26721, Lb5G29268
Poaceae	Echinochloa crus-galli	18	AH01.3747, AH02.146, AH02.2275, AH05.2014, BH01.4094 ... BH02.127, BH02.2379, BH02.3265, BH05.1167, BH05.2153, CH01.2650, CH01.4357, CH02.153, CH02.2554, CH02.3972, CH05.1544, CH05.2225, CH07.97
Poaceae	Eleusine coracana subsp. coracana	15	gene-QOZ80_1AG0001350, gene-QOZ80_1AG0023920 ... gene-QOZ80_1AG0037930, gene-QOZ80_1BG0049800, gene-QOZ80_1BG0074390, gene-QOZ80_1BG0087920, gene-QOZ80_3AG0247190, gene-QOZ80_3BG0281050, gene-QOZ80_5AG0361340, gene-QOZ80_5AG0369210, gene-QOZ80_5BG0409770, gene-QOZ80_5BG0416850, gene-QOZ80_6BG0462800, gene-QOZ80_7AG0581920, gene-QOZ80_7BG0613060
Poaceae	Hordeum vulgare	7	HORVU.MOREX.r3.1HG0070770.1, HORVU.MOREX.r3.2HG0111790.1 ... HORVU.MOREX.r3.3HG0247420.1, HORVU.MOREX.r3.3HG0270750.1, HORVU.MOREX.r3.3HG0297330.1, HORVU.MOREX.r3.4HG0379050.1, HORVU.MOREX.r3.5HG0425730.1
Poaceae	Lolium multiflorum	11	gene-QYE76_014063, gene-QYE76_014090, gene-QYE76_016508 ... gene-QYE76_020357, gene-QYE76_020358, gene-QYE76_020359, gene-QYE76_038698, gene-QYE76_051406, gene-QYE76_053719, gene-QYE76_055702, gene-QYE76_068144
Poaceae	Oryza coarctata	15	Oco01G005390, Oco01G014230, Oco01G023360, Oco02G005450 ... Oco02G014470, Oco02G024120, Oco05G012760, Oco06G013720, Oco09G012340, Oco09G018140, Oco10G000100, Oco10G012460, Oco10G018110, Oco13G015970, Oco14G016780
Poaceae	Oryza sativa	7	LOC_Os01g12390.1, LOC_Os01g42294.1, LOC_Os01g60330.1 ... LOC_Os03g21510.1, LOC_Os05g40200.1, LOC_Os05g51070.1, LOC_Os07g48310.2
Poaceae	Paspalum vaginatum	8	gene-BS78_01G364400, gene-BS78_02G392000 ... gene-BS78_03G011400, gene-BS78_03G189700, gene-BS78_03G317300, gene-BS78_06G144100, gene-BS78_09G182800, gene-BS78_09G254600
Poaceae	Puccinellia tenuiflora	11	Pt_Chr0102611, Pt_Chr0102641, Pt_Chr0200090, Pt_Chr0205097 ... Pt_Chr0305464, Pt_Chr0504554, Pt_Chr0601794, Pt_Chr0601806, Pt_Chr0603290, Pt_Chr0603295, Pt_Chr0702117
Poaceae	Sporobolus alterniflorus	22	Chr01G034020, Chr02G006290, Chr02G015840, Chr03G010690 ... Chr03G018830, Chr04G010610, Chr05G018010, Chr05G027090, Chr07G001320, Chr08G009700, Chr08G010840, Chr08G023130, Chr0G002440, Chr0G003620, Chr12G005590, Chr14G017090, Chr18G012270, Chr18G016100, Chr19G000250, Chr22G005460, Chr24G012310, Chr27G017360
Poaceae	Thinopyrum elongatum	10	Tel1E01G488100, Tel1E01G488300, Tel1E01G488700 ... Tel2E01G227100, Tel3E01G265900, Tel3E01G374800, Tel3E01G546900, Tel3E01G835500, Tel4E01G310800, Tel5E01G064700
Poaceae	Triticum dicoccoides	14	gene_TRIDC1AG044790, gene_TRIDC1BG050770 ... gene_TRIDC2AG012390, gene_TRIDC2BG015170, gene_TRIDC3AG019810, gene_TRIDC3AG032510, gene_TRIDC3AG049350, gene_TRIDC3BG024980, gene_TRIDC3BG037120, gene_TRIDC3BG055580, gene_TRIDC4AG018990, gene_TRIDC4BG031100, gene_TRIDC5AG003870, gene_TRIDC5BG003990
Poaceae	Triticum aestivum	22	TraesCS1A02G301800.2, TraesCS1B02G311700.1 ... TraesCS1B02G311800.1, TraesCS1D02G301400.1, TraesCS2A02G104100.1, TraesCS2B02G121100.1, TraesCS2D02G103800.1, TraesCS3A02G148400.1, TraesCS3A02G217800.1, TraesCS3A02G342300.1, TraesCS3B02G175300.1, TraesCS3B02G248200.1, TraesCS3B02G374400.1, TraesCS3D02G156100.1, TraesCS3D02G234500.1, TraesCS3D02G336200.1, TraesCS4A02G133400.1, TraesCS4B02G171300.1, TraesCS4D02G173400.1, TraesCS5A02G026300.1, TraesCS5B02G025300.1, TraesCS5D02G034200.1
Poaceae	Zea mays	14	Zm00001eb015890_P001, Zm00001eb138760_P001 ... Zm00001eb149650_P002, Zm00001eb161710_P002, Zm00001eb178410_P001, Zm00001eb236260_P001, Zm00001eb287170_P001, Zm00001eb290750_P001, Zm00001eb297540_P001, Zm00001eb330760_P001, Zm00001eb338910_P001, Zm00001eb357920_P001, Zm00001eb367910_P001, Zm00001eb368950_P001
Poaceae	Zoysia japonica	11	nbis-gene-11584, nbis-gene-13548, nbis-gene-13549 ... nbis-gene-14258, nbis-gene-1688, nbis-gene-25368, nbis-gene-29298, nbis-gene-29541, nbis-gene-29543, nbis-gene-32682, nbis-gene-33256
Poaceae	Zoysia macrostachya	10	Zma_g10633, Zma_g1269, Zma_g26993, Zma_g27466, Zma_g28449 ... Zma_g5796, Zma_g7087, Zma_g7209, Zma_g8186, Zma_g8886
Portulacaceae	Portulaca oleracea	14	evm.TU.LG01.1489, evm.TU.LG04.3305, evm.TU.LG05.452 ... evm.TU.LG06.1943, evm.TU.LG07.208, evm.TU.LG10.427, evm.TU.LG14.757, evm.TU.LG15.756, evm.TU.LG16.1531, evm.TU.LG16.295, evm.TU.LG17.424, evm.TU.LG23.1140, evm.TU.LG25.871, evm.TU.LG26.132
Posidoniaceae	Posidonia oceanica	6	gene.Posoc01g27200, gene.Posoc03g24610, gene.Posoc07g10390 ... gene.Posoc08g14040, gene.Posoc09g08460, gene.Posoc09g11860
Rhizophoraceae	Bruguiera sexangula	7	evm.TU.Scaffold_10_RagTag.374, evm.TU.Scaffold_14_RagTag.132 ... evm.TU.Scaffold_14_RagTag.798, evm.TU.Scaffold_16_RagTag.705, evm.TU.Scaffold_2_RagTag.524, evm.TU.Scaffold_4_RagTag.1977, evm.TU.Scaffold_4_RagTag.57
Rhizophoraceae	Carallia pectinifolia	8	nbisL1-mrna-12753, nbisL1-mrna-13164, nbisL1-mrna-13192 ... nbisL1-mrna-18277, nbisL1-mrna-24876, nbisL1-mrna-25562, nbisL1-mrna-29282, nbisL1-mrna-4667
Rhizophoraceae	Ceriops tagal	8	nbisL1-mrna-15023, nbisL1-mrna-15398, nbisL1-mrna-15507 ... nbisL1-mrna-17914, nbisL1-mrna-20536, nbisL1-mrna-2076, nbisL1-mrna-3113, nbisL1-mrna-3743
Rhizophoraceae	Ceriops zippeliana	9	nbisL1-mrna-16777, nbisL1-mrna-16778, nbisL1-mrna-17128 ... nbisL1-mrna-19112, nbisL1-mrna-2219, nbisL1-mrna-22471, nbisL1-mrna-4754, nbisL1-mrna-8600, nbisL1-mrna-9659
Rhizophoraceae	Kandelia candel	8	evm.TU.utg000007l.316, evm.TU.utg000008l.1145 ... evm.TU.utg000008l.32, evm.TU.utg000009l.642, evm.TU.utg000010l.423, evm.TU.utg000022l.143, evm.TU.utg000025l.27, evm.TU.utg000033l.251
Rhizophoraceae	Kandelia obovata	8	Maker00000265, Maker00001463, Maker00005842, Maker00008761 ... Maker00012284, Maker00014639, Maker00016161, Maker00018375
Rhizophoraceae	Rhizophora apiculata	8	nbisL1-mrna-1130, nbisL1-mrna-145, nbisL1-mrna-15877 ... nbisL1-mrna-22490, nbisL1-mrna-2314, nbisL1-mrna-23203, nbisL1-mrna-23484, nbisL1-mrna-2618
Rhizophoraceae	Rhizophora mangle	9	nbisL1-mrna-10402, nbisL1-mrna-10962, nbisL1-mrna-14749 ... nbisL1-mrna-16606, nbisL1-mrna-20524, nbisL1-mrna-21022, nbisL1-mrna-24763, nbisL1-mrna-6336, nbisL1-mrna-8971
Salicaceae	Populus euphratica	9	populus_peu03648, populus_peu05121, populus_peu14524 ... populus_peu17029, populus_peu19128, populus_peu25242, populus_peu28120, populus_peu29571, populus_peu34494
Solanaceae	Lycium barbarum	7	gene-LOC132606662, gene-LOC132611210, gene-LOC132631176 ... gene-LOC132632017, gene-LOC132632547, gene-LOC132634822, gene-LOC132644052
Solanaceae	Solanum chilense	7	SOLCI001865600, SOLCI002687500, SOLCI003185200 ... SOLCI004734400, SOLCI005382700, SOLCI006115200, SOLCI006766300
Solanaceae	Solanum pennellii	7	gene-LOC107014571, gene-LOC107014678, gene-LOC107015244 ... gene-LOC107022844, gene-LOC107023412, gene-LOC107028599, gene-LOC107031796
Tamaricaceae	Reaumuria soongarica	7	STRG.10917_chr07_-, STRG.11845_chr02_+, STRG.23367_chr05_- ... STRG.3854_chr02_-, STRG.7778_chr04_+, STRG.8265_chr05_-, gene_7455
Tamaricaceae	Tamarix chinensis	8	TC01G3974, TC01G4243, TC06G2268, TC06G2269, TC07G0955 ... TC08G1479, TC10G1629, TC12G1245
Zosteraceae	Zostera marina	8	Zosma01g29180.v3.1, Zosma02g07310.v3.1, Zosma03g30560.v3.1 ... Zosma05g04990.v3.1, Zosma05g07400.v3.1, Zosma05g28800.v3.1, Zosma06g08620.v3.1, Zosma06g26010.v3.1