Basic Information
Locus ID:
Chr06G035970
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 61265627 | 61268785 | - | Chr06G035970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 504 | 525 | 1.1 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 67 | 1.2E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 71 | 129 | 1.7E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 706 | 976 | 2.7E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 527 | 586 | 1.9E-9 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 74 | 380 | 3.14E-62 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 704 | 980 | 1.75E-68 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 302 | 588 | 1.41E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 187 | 1.1E-43 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 704 | 788 | 2.5E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 356 | 622 | 2.9E-71 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 353 | 1.3E-43 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 789 | 1003 | 2.5E-59 | - |
| SMART | SM00220 | serkin_6 | 704 | 980 | 6.6E-26 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 429 | 453 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 117 | 141 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 261 | 285 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 333 | 357 | 34.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 189 | 213 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 93 | 116 | 0.86 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 549 | 572 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 501 | 525 | 190.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 704 | 1004 | 36.852299 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 833 | 845 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 710 | 734 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 985 | 1013 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_025804564.1 | MDIS1-interacting receptor like kinase 1-like [Panicum hallii] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6RS50 | Leucine-rich repeat receptor-like protein kinase PXL2 OS=Panicum miliaceum OX=4540 GN=C2845_PM11G12120 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology