Basic Information
Locus ID:
Chr06G034230
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 60054177 | 60056284 | - | Chr06G034230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 106 | 165 | 1.1E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 76 | 4.9E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 377 | 573 | 1.8E-24 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 228 | 4.16E-25 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 377 | 643 | 7.58E-45 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 255 | 6.3E-36 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 348 | 448 | 1.6E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 449 | 654 | 3.2E-34 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 373 | 658 | 24.24477 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 22 | 6.0 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_008680891.1 | pollen receptor-like kinase 5 [Zea mays] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VA11 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_24552 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology