HalophFGD

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Basic Information
Locus ID: Chr06G032960
Species & Taxonomic ID: Sporobolus alterniflorus & 29706
Genome Assembly: GWHCBIM00000000
Description: WD40 repeats
Maps and Mapping Data
Chromosome Start End Strand ID
GWHCBIM00000006 59087764 59100026 + Chr06G032960
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
0.00 0.00 Da 0.00 0.00 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF50978 WD40 repeat-like 107 181 2.5E-7 IPR036322
Gene3D G3DSA:2.130.10.10 - 79 193 5.2E-8 IPR015943
SMART SM00320 WD40_4 104 143 0.0052 IPR001680
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G00090.1 Transducin/WD40 repeat-like superfamily protein. 0
RefSeq XP_039825310.1 transducin beta-like protein 2 isoform X3 [Panicum virgatum] 0
TrEMBL K4AC41 WD_REPEATS_REGION domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Sporobolus alterniflorus 2 Chr06G032960, Chr25G004500
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.