Basic Information
Locus ID:
Chr06G030670
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 56699369 | 56700447 | + | Chr06G030670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 37 | 299 | 1.8E-59 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 32 | 312 | 2.93E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 127 | 309 | 1.3E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 29 | 126 | 2.7E-20 | - |
| SMART | SM00220 | serkin_6 | 37 | 299 | 1.9E-78 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 37 | 299 | 44.004101 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 154 | 166 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 43 | 66 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_004954852.1 | putative cyclin-dependent kinase F-2 [Setaria italica] | 0 |
| A2X6X1 | Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. indica OX=39946 GN=CDKG-1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J9SIB4 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_56640 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology