Basic Information
Locus ID:
Chr06G026370
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
CPK24
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 49999639 | 50003364 | + | Chr06G026370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 72 | 331 | 3.80046E-138 | - |
| CDD | cd00051 | EFh | 451 | 510 | 1.43639E-9 | IPR002048 |
| CDD | cd00051 | EFh | 379 | 437 | 5.74657E-17 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 378 | 438 | 2.7E-12 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 73 | 332 | 5.7E-75 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 451 | 509 | 1.4E-10 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 362 | 511 | 7.09E-41 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 70 | 340 | 4.32E-86 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 75 | 158 | 7.0E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 159 | 339 | 1.7E-58 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 340 | 511 | 7.5E-50 | - |
| SMART | SM00054 | efh_1 | 379 | 407 | 2.7E-5 | IPR002048 |
| SMART | SM00220 | serkin_6 | 73 | 332 | 2.2E-102 | IPR000719 |
| SMART | SM00054 | efh_1 | 451 | 479 | 0.069 | IPR002048 |
| SMART | SM00054 | efh_1 | 415 | 443 | 0.014 | IPR002048 |
| SMART | SM00054 | efh_1 | 484 | 512 | 7.8E-5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 447 | 482 | 13.816021 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 411 | 446 | 9.073802 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 485 | 515 | 12.225983 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 73 | 332 | 49.163013 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 375 | 410 | 15.545536 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 493 | 505 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 193 | 205 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 460 | 472 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 79 | 102 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 388 | 400 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 424 | 436 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 550 | 574 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12480.1 | calmodulin-domain protein kinase 7. calmodulin-domain protein kinase CDPK isoform 7 (CPK7) | 0 |
| RefSeq | XP_020406694.1 | calcium-dependent protein kinase 29 [Zea mays] | 0 |
| Q2QVG8 | Calcium-dependent protein kinase 29 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK29 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9WUF0 | Calcium-dependent protein kinase 30 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_02886 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology