Basic Information
Locus ID:
Chr06G025990
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 49348064 | 49349239 | + | Chr06G025990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 11 | 274 | 7.8353E-96 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 10 | 203 | 1.3E-41 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 276 | 8.65E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 77 | 292 | 1.2E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 76 | 7.3E-28 | - |
| SMART | SM00220 | serkin_6 | 5 | 275 | 3.9E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 5 | 275 | 35.608505 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 121 | 133 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 324 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_039835961.1 | leucine-rich repeat receptor protein kinase HPCA1-like isoform X2 [Panicum virgatum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D6MY37 | Leucine-rich repeat protein kinase family protein OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d041773 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology