Basic Information
Locus ID:
Chr06G025840
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 49071895 | 49076915 | + | Chr06G025840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 646 | 794 | 1.1E-27 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 375 | 4.76E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 615 | 802 | 1.91E-49 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 182 | 283 | 4.7E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 713 | 830 | 1.6E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 181 | 7.0E-38 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 611 | 712 | 3.9E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 284 | 414 | 5.0E-17 | IPR032675 |
| SMART | SM00220 | serkin_6 | 641 | 876 | 1.7E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 641 | 1016 | 23.311926 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 757 | 769 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 956 | 974 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 864 | 980 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 901 | 941 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_004960772.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Setaria italica] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | K3Z3J1 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101770919 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology