Basic Information
Locus ID:
Chr06G023210
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 43980717 | 43985762 | + | Chr06G023210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 311 | 425 | 1.33274E-53 | - |
| CDD | cd14663 | STKc_SnRK3 | 12 | 267 | 2.90368E-170 | - |
| Pfam | PF03822 | NAF domain | 307 | 366 | 3.4E-23 | IPR004041 |
| Pfam | PF00069 | Protein kinase domain | 13 | 268 | 1.1E-72 | IPR000719 |
| SUPERFAMILY | SSF103243 | KA1-like | 337 | 424 | 9.48E-5 | IPR028375 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 302 | 9.31E-92 | IPR011009 |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 304 | 429 | 1.6E-55 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 93 | 294 | 1.3E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 92 | 1.8E-32 | - |
| SMART | SM00220 | serkin_6 | 13 | 268 | 4.3E-106 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 305 | 329 | 13.221315 | IPR018451 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 13 | 268 | 51.452721 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 132 | 144 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 19 | 42 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26980.3 | CBL-interacting protein kinase 3. encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers. | 0 |
| RefSeq | XP_052138402.1 | CBL-interacting protein kinase 32 [Oryza glaberrima] | 0 |
| Q2QY53 | CBL-interacting protein kinase 32 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK32 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9UTC6 | non-specific serine/threonine protein kinase OS=Eragrostis curvula OX=38414 GN=EJB05_29689 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology