Basic Information
Locus ID:
Chr06G022720
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 42634146 | 42636004 | - | Chr06G022720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 41 | 206 | 4.6E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 206 | 7.55E-62 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 66 | 205 | 9.7E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 39 | 2.1E-8 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 42 | 65 | 9.7E-54 | - |
| SMART | SM00220 | serkin_6 | 7 | 223 | 1.2E-45 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 7 | 226 | 28.810051 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 110 | 122 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54180.1 | cyclin-dependent kinase B1;1. Arabidopsis homolog of yeast cdc2, a protein kinase (cyclin-dependent kinase) that plays a central role in control of the mitotic cell cycle. | 0 |
| RefSeq | XP_021301397.1 | cyclin-dependent kinase B1-1 isoform X2 [Sorghum bicolor] | 0 |
| Q8L4P8 | Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKB1-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A804NJ04 | Protein kinase domain-containing protein OS=Zea mays OX=4577 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 12 | Sgl03515, Sgl08655, Sgl13622, Sgl14340, Sgl18805, Sgl19506 ... |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC120110907 |
| Brassicaceae | Brassica nigra | 2 | BniB02g081620.2N, BniB07g035400.2N |
| Poaceae | Sporobolus alterniflorus | 1 | Chr06G022720 |
| Zosteraceae | Zostera marina | 1 | Zosma01g30210.v3.1 |