Basic Information
Locus ID:
Chr06G020540
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
thaumatin-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 25655914 | 25656713 | - | Chr06G020540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 27 | 175 | 1.03095E-75 | - |
| Pfam | PF00314 | Thaumatin family | 31 | 135 | 9.1E-34 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 24 | 175 | 6.15E-57 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 24 | 144 | 7.1E-46 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 145 | 175 | 3.7E-6 | IPR037176 |
| SMART | SM00205 | tha2 | 27 | 175 | 1.0E-43 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 146 | 1.7E-44 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 141 | 175 | 0.0057 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 24 | 175 | 35.066536 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 46 | 55 | 3.2E-45 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 26 | 38 | 3.2E-45 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 68 | 79 | 3.2E-45 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 115 | 131 | 3.2E-45 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 165 | 174 | 3.2E-45 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 80 | 109 | 3.2E-45 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_020160634.1 | thaumatin-like protein [Aegilops tauschii subsp. strangulata] | 0 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WJK0 | Thaumatin-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_00163 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology