Basic Information
Locus ID:
Chr06G020490
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 25480416 | 25481130 | - | Chr06G020490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 86 | 234 | 1.69211E-67 | - |
| Pfam | PF00314 | Thaumatin family | 88 | 215 | 2.3E-31 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 83 | 234 | 7.06E-44 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 83 | 234 | 5.0E-46 | IPR037176 |
| SMART | SM00205 | tha2 | 84 | 234 | 3.3E-34 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 81 | 234 | 28.45369 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 103 | 112 | 5.3E-26 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 125 | 136 | 5.3E-26 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 138 | 167 | 5.3E-26 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 83 | 95 | 5.3E-26 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 224 | 233 | 5.3E-26 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_034588374.1 | thaumatin-like protein [Setaria viridis] | 0 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WLB8 | Thaumatin-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_00165 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology