Basic Information
Locus ID:
Chr06G019960
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Calcium-binding EGF-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 24555212 | 24557787 | + | Chr06G019960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 244 | 263 | 6.99085E-5 | - |
| Pfam | PF00069 | Protein kinase domain | 403 | 559 | 7.4E-24 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 314 | 563 | 5.26E-54 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 305 | 402 | 1.4E-19 | - |
| Gene3D | G3DSA:2.90.20.10 | Plasmodium vivax P25 domain | 177 | 281 | 7.9E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 403 | 568 | 1.9E-35 | - |
| SMART | SM00220 | serkin_6 | 331 | 564 | 1.1E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 331 | 564 | 21.813721 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 422 | 434 | - | IPR008271 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 251 | 262 | - | IPR000152 |
| Coils | Coil | Coil | 519 | 539 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21230.1 | wall associated kinase 5. encodes a wall-associated kinase | 0 |
| RefSeq | XP_039840262.1 | wall-associated receptor kinase 1-like [Panicum virgatum] | 0 |
| Q9LMN7 | Wall-associated receptor kinase 5 OS=Arabidopsis thaliana OX=3702 GN=WAK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T0V699 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3KG545600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology