Basic Information
Locus ID:
Chr06G018940
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 23039310 | 23041271 | + | Chr06G018940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 100 | 357 | 4.46622E-117 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 95 | 357 | 1.4E-64 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 82 | 355 | 3.33E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 87 | 181 | 1.5E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 182 | 366 | 1.4E-54 | - |
| SMART | SM00220 | serkin_6 | 94 | 363 | 8.8E-58 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 94 | 364 | 41.756794 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 219 | 231 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 100 | 125 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 328 | 350 | 1.8E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 176 | 189 | 1.8E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 284 | 306 | 1.8E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 213 | 231 | 1.8E-15 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 70 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04700.1 | PB1 domain-containing protein tyrosine kinase. | 0 |
| RefSeq | XP_002442438.2 | uncharacterized protein LOC8069730 isoform X1 [Sorghum bicolor] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SJC9 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_55575 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology