Basic Information
Locus ID:
Chr06G018930
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 23037114 | 23038745 | + | Chr06G018930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 81 | 176 | 6.69996E-43 | - |
| Pfam | PF00564 | PB1 domain | 97 | 177 | 1.4E-14 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 93 | 178 | 1.86E-18 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 98 | 179 | 1.1E-11 | - |
| SMART | SM00666 | PB1_new | 92 | 179 | 2.1E-23 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.3 | - | 0 |
| RefSeq | XP_039802664.1 | uncharacterized protein LOC120666789 [Panicum virgatum] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SJC9 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_55575 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology