Basic Information
Locus ID:
Chr06G018820
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000006 | 22771138 | 22785100 | - | Chr06G018820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 200 | 531 | 8.6E-109 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 194 | 565 | 8.58E-118 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 189 | 543 | 1.5E-134 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 192 | 539 | 4.2E-166 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 194 | 531 | 120.496178 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 427 | 438 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 266 | 287 | 3.4E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 481 | 502 | 3.4E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 395 | 412 | 3.4E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 428 | 446 | 3.4E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 139 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 148 | - | - |
| Coils | Coil | Coil | 2146 | 2180 | - | - |
| Coils | Coil | Coil | 2409 | 2429 | - | - |
| Coils | Coil | Coil | 2345 | 2365 | - | - |
| Coils | Coil | Coil | 812 | 832 | - | - |
| Coils | Coil | Coil | 2526 | 2567 | - | - |
| Coils | Coil | Coil | 639 | 659 | - | - |
| Coils | Coil | Coil | 1417 | 1455 | - | - |
| Coils | Coil | Coil | 995 | 1015 | - | - |
| Coils | Coil | Coil | 2498 | 2518 | - | - |
| Coils | Coil | Coil | 611 | 631 | - | - |
| Coils | Coil | Coil | 906 | 951 | - | - |
| Coils | Coil | Coil | 1520 | 1547 | - | - |
| Coils | Coil | Coil | 2216 | 2236 | - | - |
| Coils | Coil | Coil | 538 | 565 | - | - |
| Coils | Coil | Coil | 1492 | 1512 | - | - |
| Coils | Coil | Coil | 1041 | 1089 | - | - |
| Coils | Coil | Coil | 1687 | 1707 | - | - |
| Coils | Coil | Coil | 1019 | 1039 | - | - |
| Coils | Coil | Coil | 2630 | 2650 | - | - |
| Coils | Coil | Coil | 2076 | 2103 | - | - |
| Coils | Coil | Coil | 2041 | 2068 | - | - |
| Coils | Coil | Coil | 1843 | 1870 | - | - |
| Coils | Coil | Coil | 777 | 804 | - | - |
| Coils | Coil | Coil | 2577 | 2611 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_034585169.1 | kinesin-like protein KIN-12F isoform X2 [Setaria viridis] | 0 |
| B9GE13 | Kinesin-like protein KIN-12F OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12F PE=3 SV=1 | 0 | |
| TrEMBL | A0A2T8KLW5 | Kinesin motor domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_3G480200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology